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GB/T 43628-2023Method for identification of airborne pathogenic microorganism based on metagenomics sequencing (English PDF)

空气中病原微生物宏基因组测序鉴定方法

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Issued by

SAMR; SAC

Level / Type

National · Recommended

Issue date

December 28, 2023

Implementation date

July 1, 2024

Scope

GB/T 43628-2023 is the English-translated version of 空气中病原微生物宏基因组测序鉴定方法.

GB/T 43628-2023 is the Chinese standard "Method for identification of airborne pathogenic microorganism based on metagenomics sequencing".

Its scope clause reads: This document specifies the test conditions, test procedures, quality control and identification of metagenomic sequencing and identification methods for airborne pathogenic microorganisms: This document is suitable for metagenomic sequencing identification and monitoring of pathogenic microorganisms such as bacteria, fungi, and viruses in the air:. Its clauses include normative reference documents; terms and definitions.

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Document preview — GB/T 43628-2023

National Standard of the People's Republic of China

ICS
07.080
Classification
A 40

Issued by: State Administration for Market Regulation; Standardization Administration of the PRC

Contents

  • Preface
  • Introduction
  • 1 Scope
  • 2 Normative references
  • 3 Terms and Definitions
  • 4 Abbreviations
  • 5 Principle
  • 6 Reagents
  • 7 Instruments and Equipment
  • 8 Test step
  • 9 Quality Control
  • 10 Identification of airborne pathogenic microorganisms
  • Appendix A (informative) Nucleic acid extraction method
  • Appendix B (informative) Sequencing process
  • Appendix C (informative) Reference genome database and selection of pathogenic microorganisms
  • Appendix D (informative) Example 10 of comparative analysis of Yersinia pestis and SARS virus sequencing data

1 Scope

This document specifies the test conditions, test procedures, quality control and identification of metagenomic sequencing and identification methods for airborne pathogenic microorganisms:

This document is suitable for metagenomic sequencing identification and monitoring of pathogenic microorganisms such as bacteria, fungi, and viruses in the air:

2 Normative reference documents

The contents of the following documents constitute essential provisions of this document through normative references in the text: Among them, the dated quotations

For undated referenced documents, only the version corresponding to that date applies to this document; for undated referenced documents, the latest version (including all amendments) applies to this document:

GB/T 6682 Specifications and test methods for water used in analytical laboratories

GB/T 18204:3 Hygienic inspection methods for public places Part 3: Airborne microorganisms

GB 19489 General requirements for laboratory biosafety

GB/T 30989 High-throughput gene sequencing technical regulations

GB/T 39990 Technical conditions for particle bioaerosol sampler

GB/T 40974 Nucleic acid sample quality evaluation method

GB 41918 biological safety cabinet

WS589 Pathogenic Microbiology Laboratory Biosafety Label

3 Terms and definitions

The following terms and definitions apply to this document:

3:1

Microorganisms that invade organisms and cause infections or even infectious diseases, including bacteria, fungi, viruses, etc:

3:2 metagenome metagenome

The sum of the genetic material of all microorganisms in a specific environment, including the genomes of cultivable and uncultivable microorganisms:

[Source: JJF1265-2022,4:54]

3:3

Sequencing

Determination of the order and composition of the nucleotide bases (adenine, guanine, cytosine, thymine or uracil) in nucleic acid molecules:

Note: Sequences are usually expressed from 5' end to 3' end:

[Source: ISO 20397-2:2021,3:19]

3:4

Library

A group of nucleotide submolecules obtained from biological sources, artificial synthesis or cloning technology, such as genomic libraries and complementary

DNA library:

GB/T 44830 | GB/T 40179 | GB/T 40267 | GB/T 47334 | GB/T 43629.1 | […]

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This preview omits tables, figures, formulas and parts of the technical clauses. The complete document — 17 pages — is available in the English PDF.

Referenced standards

Editions of GB/T 43628

EditionTitleRevisionStatus
GB/T 43628-2023Method for identification of airborne pathogenic microorganism based on metagenomics sequencingcurrent editionCurrent

This page sells the current edition, GB/T 43628-2023. Earlier editions are listed for reference only.

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