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GB/T 36136-2018General requirements of DNA array-based M.tuberculosis drug resistance detection (English PDF)

结核分枝杆菌耐药基因芯片检测基本要求

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Issued by

SAMR; SAC

Level / Type

National · Recommended

Issue date

May 14, 2018

Implementation date

December 1, 2018

Scope

GB/T 36136-2018 is the English-translated version of 结核分枝杆菌耐药基因芯片检测基本要求.

GB/T 36136-2018 sets the basic requirements for detecting drug resistance genes of Mycobacterium tuberculosis with DNA microarray chips. It applies to genes linked to resistance against the common first-line and second-line anti-tuberculosis drugs, tested on bacteria isolated from clinical samples.

The method amplifies the target fragments by PCR with primers carrying a luminescent label and hybridizes the products with specific probes arranged on the chip, so that the resistance genotype of the sample can be read from the signal pattern.

The standard also covers the instruments, materials and reagents, such as the microarray scanner, hybridization equipment and nucleic acid amplifier, and refers to YY/T 1153 and YY/T 1154 and to the national rules for clinical gene amplification laboratories. It was issued on 14 May 2018 and has applied since 1 December 2018.

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Document preview — GB/T 36136-2018

National Standard of the People's Republic of China

ICS
11.040.55
Classification
C 30

Issued by: State Administration for Market Regulation; Standardization Administration of the PRC

Contents

  • Foreword
  • 1 Scope
  • 2 Normative references
  • 3 Abbreviations
  • 4 Principle
  • 5 Instrument materials and reagents

Foreword

This standard was drafted in accordance with the rules given in GB/T 1.1-2009.

1 Scope

This standard specifies the basic requirements for detection of M. tuberculosis drug resistance gene chips.

This standard is applicable to the detection of resistance-related genes of common first- and second-line anti-tuberculosis drugs from Mycobacterium tuberculosis derived from clinical samples.

2 Normative references

The following documents are indispensable for the application of this document. For dated references, only dated versions apply to this document. For undated references, the latest edition (including all amendments) applies to this document.

YY/T 1153 DNA microarray chip for in vitro diagnosis

YY/T 1154 laser confocal scanner

Management Measures for Clinical Gene Amplification in Medical Institutions (Wei Ban Medical Administration [2010] No. 194)

3 Abbreviations

The following abbreviations apply to this document.

DNA. Deoxyribonucleic Acid

PCR. Polymerase Chain Reaction

4 Principle

Design specific PCR amplification primers and phases based on the specific conserved nucleic acid sequences of clinically common M. tuberculosis resistance genes The oligonucleotide probe should be.

Using the DNA of Mycobacterium tuberculosis isolated from clinical samples as a template, adding primers with terminal luminescent markers, using PCR technology The target fragment of the drug resistance gene is amplified, and the amplified DNA to be tested carries a luminescent marker.

The PCR amplification product labeled with the luminescent label is hybridized with the probe on the chip under certain conditions, according to the mutual base Complementing the principle, the sequence-matched PCR amplification product forms a stable secondary structure with the probe. According to the specific arrangement of the probe on the chip By setting, the relevant information of the corresponding test DNA can be detected, and the drug resistance gene information of the sample is inferred.

5 Instrument materials and reagents

5.1 Instruments and materials

Microarray chip scanner, microarray chip hybridization cassette, nucleic acid that should meet the requirements of YY/T 1154 and obtain medical device registration certificate Amplifier, chip hybridization instrument (optional), chip washer (optional), refrigerator (-20 ° C), micro sampler and sampler tip, constant temperature water bath Pots, microcentrifuges, centrifuge tubes, constant temperature shakers, chip washing containers and slide holders.

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This preview omits tables, figures, formulas and parts of the technical clauses. The complete document — 15 pages — is available in the English PDF.

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